Toggle navigation
panX: Pan-genome Analysis & Exploration
Applications
Methods
Downloads
How to run
Tutorials
Contact
Species
Prochlorococcus marinus (Biller et al)
Epidemiology of S. pneumoniae (Croucher et al)
Prochlorococcus marinus (Biller et al)
MDR Neisseria gonorrhoeae in Europe (Harris et al)
Acetobacter pasteurianus (12)
Achromobacter xylosoxidans (17)
Acinetobacter baumannii (205)
Acinetobacter haemolyticus (11)
Acinetobacter indicus (18)
Acinetobacter johnsonii (17)
Acinetobacter nosocomialis (9)
Acinetobacter pittii (27)
Acinetobacter seifertii (22)
Actinobacillus pleuropneumoniae (29)
Aeromonas caviae (24)
Aeromonas hydrophila (43)
Aeromonas media (9)
Aeromonas salmonicida (15)
Aeromonas veronii (23)
Aggregatibacter actinomycetemcomitans (14)
Agrobacterium tumefaciens (15)
Akkermansia muciniphila (47)
Alcaligenes faecalis (11)
Alteromonas mediterranea (13)
Avibacterium paragallinarum (10)
Bacillus altitudinis (23)
Bacillus amyloliquefaciens (30)
Bacillus anthracis (50)
Bacillus cereus (55)
Bacillus cytotoxicus (15)
Bacillus licheniformis (32)
Bacillus mycoides (38)
Bacillus paralicheniformis (14)
Bacillus pumilus (12)
Bacillus safensis (9)
Bacillus subtilis (103)
Bacillus thuringiensis (36)
Bacillus velezensis (112)
Bacteroides fragilis (21)
Bartonella henselae (12)
Bartonella krasnovii (12)
Bifidobacterium animalis (30)
Bifidobacterium bifidum (11)
Bifidobacterium breve (41)
Bifidobacterium longum (39)
Bordetella bronchiseptica (20)
Bordetella hinzii (16)
Bordetella holmesii (33)
Bordetella parapertussis (45)
Bordetella pertussis (500)
Borrelia miyamotoi (22)
Borreliella burgdorferi (9)
Bradyrhizobium diazoefficiens (16)
Brucella abortus (19)
Brucella melitensis (32)
Brucella suis (19)
Burkholderia cenocepacia (22)
Burkholderia cepacia (15)
Burkholderia glumae (10)
Burkholderia mallei (25)
Burkholderia multivorans (43)
Burkholderia pseudomallei (63)
Burkholderia thailandensis (20)
Campylobacter coli (27)
Campylobacter concisus (14)
Campylobacter fetus (20)
Campylobacter jejuni (120)
Campylobacter lari (10)
Candidatus Liberibacter (10)
Candidatus Portiera (11)
Chlamydia abortus (9)
Chlamydia muridarum (20)
Chlamydia pneumoniae (10)
Chlamydia psittaci (18)
Chlamydia trachomatis (45)
Citrobacter freundii (54)
Citrobacter koseri (10)
Citrobacter portucalensis (18)
Clavibacter michiganensis (30)
Clostridioides difficile (50)
Clostridium botulinum (25)
Clostridium butyricum (10)
Clostridium perfringens (44)
Corynebacterium diphtheriae (31)
Corynebacterium glutamicum (30)
Corynebacterium pseudotuberculosis (56)
Corynebacterium ulcerans (17)
Coxiella burnetii (11)
Cronobacter sakazakii (12)
Cutibacterium acnes (25)
Dehalococcoides mccartyi (21)
Deinococcus radiodurans (11)
Dickeya dianthicola (13)
Dickeya zeae (9)
Dolosigranulum pigrum (13)
Edwardsiella piscicida (10)
Elizabethkingia anophelis (26)
Enterobacter asburiae (22)
Enterobacter cloacae (32)
Enterobacter hormaechei (105)
Enterobacter kobei (16)
Enterobacter ludwigii (15)
Enterobacter roggenkampii (27)
Enterococcus faecalis (64)
Enterococcus faecium (127)
Enterococcus hirae (16)
Erwinia amylovora (18)
Erysipelothrix rhusiopathiae (9)
Escherichia albertii (19)
Escherichia coli (500)
Escherichia fergusonii (25)
Faecalibacterium prausnitzii (10)
Flavobacterium columnare (27)
Flavobacterium psychrophilum (18)
Francisella orientalis (20)
Francisella tularensis (28)
Fusobacterium nucleatum (20)
Gardnerella vaginalis (12)
Glaesserella parasuis (20)
Haemophilus influenzae (46)
Haemophilus parainfluenzae (14)
Helicobacter cinaedi (9)
Helicobacter pylori (169)
Histophilus somni (26)
Klebsiella aerogenes (34)
Klebsiella grimontii (13)
Klebsiella michiganensis (36)
Klebsiella oxytoca (28)
Klebsiella pneumoniae (500)
Klebsiella quasipneumoniae (40)
Klebsiella variicola (29)
Lacticaseibacillus paracasei (27)
Lacticaseibacillus rhamnosus (32)
Lactiplantibacillus plantarum (85)
Lactobacillus crispatus (15)
Lactobacillus delbrueckii (22)
Lactobacillus gasseri (10)
Lactobacillus helveticus (20)
Lactobacillus johnsonii (15)
Lactococcus cremoris (17)
Lactococcus garvieae (12)
Lactococcus lactis (28)
Latilactobacillus curvatus (10)
Latilactobacillus sakei (26)
Leclercia adecarboxylata (11)
Legionella pneumophila (52)
Leptospira interrogans (31)
Leuconostoc mesenteroides (21)
Levilactobacillus brevis (18)
Ligilactobacillus salivarius (13)
Limosilactobacillus fermentum (29)
Limosilactobacillus reuteri (27)
Listeria innocua (10)
Listeria monocytogenes (137)
Mammaliicoccus sciuri (11)
Mannheimia haemolytica (50)
Metamycoplasma hominis (14)
Micrococcus luteus (12)
Moraxella catarrhalis (10)
Morganella morganii (42)
Mycobacterium avium (31)
Mycobacterium intracellulare (36)
Mycobacterium tuberculosis (157)
Mycobacteroides abscessus (34)
Mycolicibacterium smegmatis (10)
Mycoplasma capricolum (21)
Mycoplasma gallisepticum (19)
Mycoplasma mycoides (31)
Mycoplasma pneumoniae (39)
Mycoplasmopsis bovis (32)
Mycoplasmopsis synoviae (14)
Myxococcus xanthus (10)
Neisseria gonorrhoeae (41)
Neisseria meningitidis (61)
Paenibacillus polymyxa (27)
Pantoea agglomerans (12)
Pantoea ananatis (12)
Parabacteroides distasonis (11)
Pasteurella multocida (56)
Pectobacterium brasiliense (16)
Pectobacterium carotovorum (10)
Pectobacterium parmentieri (13)
Pediococcus acidilactici (22)
Pediococcus pentosaceus (20)
Phaeobacter inhibens (19)
Photobacterium damselae (14)
Piscirickettsia salmonis (40)
Porphyromonas gingivalis (24)
Prevotella intermedia (12)
Prevotella melaninogenica (12)
Priestia megaterium (28)
Propionibacterium freudenreichii (16)
Proteus mirabilis (42)
Proteus terrae (10)
Providencia alcalifaciens (9)
Providencia rettgeri (27)
Providencia stuartii (10)
Pseudomonas aeruginosa (223)
Pseudomonas chlororaphis (26)
Pseudomonas fluorescens (26)
Pseudomonas protegens (17)
Pseudomonas putida (40)
Pseudomonas stutzeri (27)
Pseudomonas syringae (42)
Pseudosulfitobacter pseudonitzschiae (38)
Ralstonia solanacearum (51)
Raoultella ornithinolytica (18)
Rhizobium leguminosarum (24)
Rhizobium phaseoli (13)
Rhodococcus equi (12)
Rhodococcus pyridinivorans (9)
Rickettsia japonica (12)
Rickettsia rickettsii (12)
Riemerella anatipestifer (28)
Salmonella bongori (10)
Salmonella enterica (500)
Serratia marcescens (54)
Serratia plymuthica (14)
Shewanella algae (16)
Shewanella putrefaciens (10)
Shigella boydii (9)
Shigella dysenteriae (10)
Shigella flexneri (27)
Sinorhizobium meliloti (23)
Staphylococcus argenteus (12)
Staphylococcus aureus (500)
Staphylococcus epidermidis (48)
Staphylococcus haemolyticus (18)
Staphylococcus lugdunensis (20)
Staphylococcus pseudintermedius (34)
Staphylococcus saprophyticus (14)
Stenotrophomonas maltophilia (31)
Streptococcus agalactiae (45)
Streptococcus anginosus (10)
Streptococcus dysgalactiae (24)
Streptococcus equi (30)
Streptococcus gordonii (11)
Streptococcus mutans (18)
Streptococcus oralis (16)
Streptococcus pneumoniae (66)
Streptococcus pyogenes (125)
Streptococcus salivarius (17)
Streptococcus suis (42)
Streptococcus thermophilus (39)
Streptomyces clavuligerus (12)
Thermus thermophilus (20)
Trueperella pyogenes (9)
Vibrio alginolyticus (30)
Vibrio anguillarum (13)
Vibrio campbellii (9)
Vibrio cholerae (50)
Vibrio parahaemolyticus (37)
Vibrio vulnificus (20)
Weissella cibaria (11)
Weizmannia coagulans (13)
Xanthomonas arboricola (17)
Xanthomonas campestris (22)
Xanthomonas citri (46)
Xanthomonas oryzae (53)
Xanthomonas phaseoli (10)
Xanthomonas translucens (27)
Xylella fastidiosa (36)
Xylella taiwanensis (17)
Yersinia enterocolitica (19)
Yersinia pestis (28)
Yersinia pseudotuberculosis (21)
Yersinia ruckeri (14)
Zymomonas mobilis (15)
Pseudomonadales
Enterobacteriales
Vibrionales
Searching ...
Core vs. Accessory
cutoff:0.99
Gene count rank distribution
Gene length distribution
Gene cluster table
Sequence alignment
Strain tree (SNPs in all core genes)
Layouts
Scale
Scale
Label
Label
Synchr
Synchr
Gene tree (individual gene)
Layouts
Scale
Scale
Label
Label
Right-left
Left-right
Strain meta-info table
Show
10
25
50
100
entries
Unselect all clicked items
Search:
Accession
Strain
GC content(%)
Depth see
Ecotype
Location
Genome size(Mb)
Accession
Strain
GC content(%)
Depth see
Ecotype
Location
Genome size(Mb)
Loading...
Showing 0 to 0 of 0 entries
Previous
Next
